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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169605715, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVGNLDPEL RPTDLSGGTG ARFARAIIIV AGSCALVASL LTFVKNYRKP VLQRYVVRIL  60
   61 LMVPIYSGAS WASLVSITAA SYVDPLRDVY EAFTIYTFLQ LLINFIGGER ALIILMTGRA 120
  121 PVPHPWPLNL MFEKIDISDP HTFLAVKRGI LQYAWVKPLL SVAAIIMKAT GTYQEGYIGW 180
  181 TSGYFWSGII YNVSITISLY ALAMFWVCMS QDLQPFRPMP KFLCIKGIIF ASYWQGFFLS 240
  241 ILVWLGAIPD DVPGYNPDNL AAAIQDALIC FEMPLFAMAH WYAFSWHDYA DDTISAARLP 300
  301 VKYALRDSFG PLDLIQDTKE VFAGRHYEYR YFDARDNVLA HEQSASRAAR MAEGMRYERG 360
  361 GKGKYWIPKP GQSEHEPLLN KVSGSRARAM SPGPHQALKG TGAITGAHDD DMEDPNLSPE 420
  421 DERLFESARE LEFGDWNYPV IEAHRASRED RLYGEPPVIT AATNRNLLQP TAANRKRRKS 480
  481 QIKDIQKSVD KGKHRSDSSA SNGESSHSKS HLPIVGKLLR QKSSSSSSAK SDKSQLVDLV 540
  541 VEDHNAEEIE RVRARKEGGS AWNEEPAKHF VKTFPGAGAE EEVREGFAPD VPEAHNPEMI 600
  601 HNLDYPFTVE EESEEELKKK GIKPPINEEA ERWESRNLDD EPDNSNDDRP SPQYASFREE 660
  661 RNIWNDDDR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle