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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NTE1_PHANO
Protein type: Transmembrane
Type Confidence: 0.84
Topology Confidence: 0.44
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPDAMTSL VKSSVALLSS AHESLPTSLA AMKTAETAPS STFGILGRVI LSILSVLPTL  60
   61 LFWVSYTLPT WLFTLFSMSL TFTMNFTTLM LVLVFVVSTI SYFVRYRYLT MYARLPPEPQ 120
  121 REEPQVEVFP ESQEGDSKRG LSNYLDEFLS AIKVFGYLER PVFHELTRTM QTRRLAAGET 180
  181 ILLEEEKGFC LVVDGLVQIF VKSNREESDS DEDDGELQGE SGGGSAQAHR QGYQLLTEVK 240
  241 NGAPMSSLFS ILSLFTEDVK LRHDEDSGPS SSTPMSPQHR PSMTRNSSFN MDDSRPETPI 300
  301 EAQEATIRRR RTSALASPTA GGRLSNVPPL SLDTDGFNDN FKHSKQRRSP SRSTKPKSAH 360
  361 PDIVARATVD TTIAIIPATA FRRLTRIYPK ATAHIVQVIL TRLQRVTLAT SHAYLSLTNE 420
  421 VLRTEKLMNK YTTYDLPGFL RDAPLERLKE KFTKETERLG SDEGMKGIAL HNPGAGRRRR 480
  481 TSVSIRSSTA AQARLAAARG TSIGSNVEAI SRLTSPEQGM RNDRISAGDL LTNTQMSRGT 540
  541 GRSGRSSFSQ PYQHDVRRDA RTPLDASGFN PFASPSMRPN LHRQESIDEA TVFRESVLGC 600
  601 MFKAIGLTSP ENPVPRPAAS VEQSPRLVSF DAKRQKAIFT SAFGFMDPYE ASRDGDADSV 660
  661 ASASNLSTLS ASGNGNLLEE VVNDVEIVFF PKDAVLVEQG ERNPGLYYVI DGFLDVSVAV 720
  721 EEDSSESNVL GTLPTGPAVT EDDLFGPPLQ PTATNTSLRN GENSKKKRSR KSLFMTRPGG 780
  781 LAGYLGTVSS NRSFVDVTAK TDVYVGFLPR ASIERIVERY PVVLLTMAKR LTTLLPRLIQ 840
  841 HIDFALEWVQ VNAGQVIYNQ GEESDAIYIV LNGRLRAIKD AENGKVTVIG EYGQGDSVGE 900
  901 LEVLTETARP GSLHAIRDTE LAKFPKTLFN SLALEHPGIT IKISKIIASR MRALVDDPLH 960
  961 EQSKERSNKA TRTNVSSTVN LRTVAILPVT AGIPVVDFAS RLMNALNQIG VPRGVVSLNQ1020
 1021 AAILNHLGRH AFNRMGKLKL SQYLADLEEK YGMVLYVADT PVKSPWTQTC ISQADCILLV1080
 1081 GLAESSPNIG EYERFLLTTK TTARKELVLL HAERYCPSGL TRKWLRNWPW INGSHHHMQM1140
 1141 SFRATAEPVH QTGRRLGNAI KQRVQVIQAE IQKYTSKRVR QTPLYSADTP FKGDFHRLAR1200
 1201 RLCGKSVGLV LGGGGARGIS QIGIIRALEE AGIPIDIVGG TSIGSFIGAL YAWDADVVPM1260
 1261 YGRAKKFSGR MGSMWRFALD LTYPSASYTT GHEFNRGIFK TFGNSQIEDF WLEFYCNTTN1320
 1321 ISKSRSEIHT SGYVWRYVRA SMSLAGLLPP LCDNGSMLLD GGYIDNLTVA HMKSLGADVI1380
 1381 FAIDVGSLDE DTPQAFGDSL SGFWATFNRW NPFSTHANPP TLSEIQSRLA YVSSIDALER1440
 1441 AKNTPGCRYM RPPIDPYGTL DFAKFEEIYE VGYKYGKGFL AQLREQGVLP VTEETEKEKN1500
 1501 LRRTMAPRRA SI

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