YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111063013
Protein type:	Transmembrane
Type Confidence:	0.81
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLSIVAMRA RIISRYRLGG AGRNSQLPAQ PHRRPPISPP LSCQPSRQDE LYPEARSLDP  60
   61 DPSQDCFSQR KNSPSLASNP PTPQHSHAQP TQIGGPSSSS PALNRHLTRH LNKHIMHDTC 120
  121 ANASKVIGSS PNAVRMQKVV SFYEKLPRGP APEPEGKGLL GRYQKKYMGK NASARPLVHV 180
  181 IGFLIAFGYA QNYYFHLRHH KNNTH

Type	Start	End	Confidence
Cytoplasmic	1	171	0.77
Transmembrane Helix	172	190	0.71
Non-Cytoplasmic	191	205	0.80