YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111062769, gi...
Protein type:	Transmembrane
Type Confidence:	0.92
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGTDCFLML LSVLFPPIGV WVKKGICGAD SLINLALCCL GFLPGLLHAW YIILQNPENL  60
   61 EQYHQIPDGE RGTTYYVITH EQPGRQSYGT VGSQPAGGQF PGQQSGGVGS FAGQQQKNVK 120
  121 GAKTVTTPQQ GGEGSSSQPE GPPPTYADVI KGDHKVQSP

Type	Start	End	Confidence
Cytoplasmic	1	31	0.53
Transmembrane Helix	32	52	0.88
Non-Cytoplasmic	53	159	0.90