YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111062519
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRPARGSIP SFHGPPLTIV TQHHDGTDEH STLLSRGLIL PPKTTSRSSS SSPKKQLRAG  60
   61 KKHRTMASAS SSTSLLYACI AHDTTVLAEH TASASSNASS LISMILPLIA KENPPETRRS 120
  121 YDKDNHSVHL LMRKPANAKS PGRLIFLVVA EKAAGKGVPY GFLQTLQDKF FAQFDVDDTA 180
  181 FGDLPSYGCA SFNAELKRVM MHQGGTLAGQ EDALRTAQRE IDGVREIMTE NIERVLERGE 240
  241 HMSVLVDKTG RLGENARDFR VRSRTLRRKM WWKNVKLMVL LFVVCLFLIY IFVGFGCGLP 300
  301 AWGRCLRR

Type	Start	End	Confidence
Cytoplasmic	1	276	0.87
Transmembrane Helix	277	296	0.93
Non-Cytoplasmic	297	308	0.77