YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111062232
Protein type:	Transmembrane
Type Confidence:	0.79
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAANTTSNIT AATLVMATPH DKAMLLDVHG LLDKIFARNQ NQHRRSHWWK SLHAFRKQLG  60
   61 LLLEEMAGSK AEAKIEARLR YWDEKFIHMW YYQFSQLVAV GPFAMLGIVM MASVARVCRI 120
  121 CGITAVYEEI ASGDIKGVLS ANDELALAGE FAGVLDEEEG WGEDEGVVVE REE

Type	Start	End	Confidence
Non-Cytoplasmic	1	93	0.59
Transmembrane Helix	94	115	0.69
Cytoplasmic	116	173	0.44