YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111061797
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANVIRQCAA DEGWDGSDME SSHAKFGQQL KTSQNREWIF YYIDYDGLKD ALRVHHIWDE  60
   61 KSEQSFIEQL EKELDKVYTF QRVKAEEIIR RIASSEREVA EAVNRSQQTP GGDFEEDFDI 120
  121 LEEDLSEIIA DVHDLAKFTQ LNYTGFQKII KKHDKNTRWF LKPVFAARLK RKPFFQDNYD 180
  181 SYVLKLSRLY DIVRTRGNPI KGDSGAGGKQ QNFVRQTTKY WVHPDNIVEL KLIILKHLPV 240
  241 LVFNPNKEFN EEDTAITSIY FDNTDTWELY EGRLKKTEGA EAIRMRWYGG MKSETIFVER 300
  301 KTHREDWTGE ESVKARFKIK EKNLNAYLRG ELKPEQIFEK ERREQKRPEK DIASDEQLAR 360
  361 EIQYRCLTRK LGPVTRSFYH RTAFQLPGDA RVRISLDTEL TMTREDNLDG KKRAGDNWRR 420
  421 MDIGVDWPFK QLPAEDKELF PYAVLEVKLQ TQAGQDPPQW IRELTSSHLV EAVPKFSKYI 480
  481 HGTATLNPTR IHLIPYCLSA TSLVSNDPGA SNDISTSGNL DDDSDEEDAV VGLPAANGTE 540
  541 DDARLARLRS ARDTMEQNEM DRQRDYGTLT NANDPNTLDI EERVAADEDE DYEQAKKQGG 600
  601 LRYARKWVER TATNVGSTVM NGLIAIVPKP TPTDVGDGGF QLGVPTWKQA GEVKRFKAPK 660
  661 GKRIHVPVRV EPKVQLATER TFLSWLEFSI LIGSIAATLL NFGDTLSFAA AWAFTIIACV 720
  721 ALIYSASLYL WRVRKIRERR AVVYHDKWGP TLLCIGLFAA VAVSFGYRFG KGGFDGGLKG 780
  781 DLKGKLTG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle