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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169613773, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAWEHLSITK PHLVYIILGG FTSLFMLCSS VIKERLYIGE ATVATLCGII FGPHAANLID  60
   61 PGSWGNVDLI TLEFSRIVLV VQCFAVGVEL PRAYMEKHWR SVSLLLIPVM TFGWLITSLF 120
  121 IWGLFSSHLN WLDSLCIAAC VTATDPVLAS SVVGKGKFAK RVPKHLRDLL SAESGCNDGM 180
  181 AFPFVYLAIY LIRYRPDADK VFFHWFCYTI LYECLFGAFF GVMVGYAARR AIRWAHEKDL 240
  241 IDRESFLVFY FVLALFCAGS GSLLGMDDLL VGFACGVGFS NDGWFLEKTE ESHVSNVIDL 300
  301 LINLAFFVYF GAIIPWEQFN APDIIGLTPW RLVVLGLLVL FFRRIPIMLM LKPVIPDIKT 360
  361 WREASFAGHF GPIGVGGLFV AILARAELET ESTTPLAELP PEGFEHLNII EMIWPITCFL 420
  421 VIVSIIVHGS SIAVFTLGKR INTLTISLSY TQANEDGPGW MDRLPRIQSR SKTSMSGRRM 480
  481 SESSFDEKAE ATGTGLLPPP GYAGNFLRRQ KEEDNPSRSS SRRPTNRKSK WDAGRGPGGP 540
  541 ISASAIGPNR RRDEEKADSG SPDQDTDTFA DTTAVSSDSS NSGKEKMKKQ FPEEEIYQEG 600
  601 HQTVIEDREG NVLEVMDDSG HHGRERDAHD RQEAADLLSD EDVEGGVAQK EHGGAVEKAP 660
  661 GKAVDAAEHP HKTWRKRMQS FSGHHQKGDD AAKPKPAQSR GPALAYQFGN TIIVEDGDGE 720
  721 VIKKYDIPSQ KKDKRPETQR GASMAGGTSR AIQSLKRMGT QLGVPTHDSG PSNSQGAEEK 780
  781 KKKKPAADDE DDDLLRFTVT AGGRRMSKME FITQMSQMDP KARAKFVENS NAPEAVKDAA 840
  841 HEDAKEHKEL ERKAAVSTKA KIPAVVGEEG EAEIQKIESP AANEEGRPRG PTGLTLVDSN 900
  901 NEDVPFHSVH QDIQNYSMDQ GKSETAAQRR RREASQQAQP APDSAENESE EESPAERRRR 960
  961 LAALSGSTSP SAPITRRKQS HSPEAEKGFE GETAAERKRR LGALGVGDDD SPESDSEGEE1020
 1021 GGDPMETGRG THSEQKTTPA ARTPGIRFAE QPRIPTKDER AADDREEKER EGDKKKGLGK1080
 1081 LFRK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle