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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111060731
Protein type: Globular with Signal Peptide
Type Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHFLDTLSLV FSFLIALLVC CMLLALTRLG ASLKLFSPKQ SPSYPASTHL RTRLSTARPN  60
   61 RVSTSPRPYY GYLSTRPQST VTMFKQAVNN HNAAIPQPAP TAASKQQSLG SSFARTGSTQ 120
  121 SNTNPLASST KQNGAGKPGL SGPLARGSYN QGTKRTSTGL AKTLDFHEDI IDYPTLNIVD 180
  181 LEKENDLPMA YSASARTKSA GLATALFDED DFDSDIDLDV EDPATKGSVS YPKLPHTTSS 240
  241 ESRDSGYQSH PQTAAQKLEL DSSQPIPWSS SPLEHFKTPR KVEPAKPRAR RAFLPWSQNQ 300
  301 KAANTQEAKD EIDSEEEIIR PKKRQTTEVK AEVAATPKPK SQYLWNATAS ALKEQQKNLR 360
  361 EQNKKQTKEA DTSVDDLQAA VKKRKKNAVA RIFLSEEQQN VLNLVTEYKK SVFFTGSAGT 420
  421 GKSVLLREII AALRRKYVRE PDRVAVTAST GLAACNVGGV TLHSFSGIGL GKEPAEDLIK 480
  481 KIRRNAKAKQ RWMRTKVLIM DEVSMVDGDL FDKLEQIART IRNNGRPFGG IQLVITGDFF 540
  541 QLPPVPEYGK ASKFAFDAGT WTTSIEHTIG LTHVFRQKDP VFANMLNEMR EGRLTPDSIA 600
  601 RFRKLDRALP ASDENIEATE LFPTRQEVDR ANNLRMQQLH GTVFSFEARD GGTITNKEQR 660
  661 DRLLQSCMVP EVVHLKKGAQ VMLVKNMDDT LVNGSLGKVT GFMTEQMFVL YKEDEEAFLE 720
  721 GGASEQAMKN EMAKSTLGLN TAQVFPVVRF AIADGTTRDL LCKREDWKIE LPNGEVQASR 780
  781 SQIPLILAWA LSIHKAQGQT LERVRVDLGR VFEKGQAYVA LSRATSMAGL QILRFDPRKV 840
  841 IAHEKVRSFY SSLSRAEQVE GKAKSKTILG KMQTATAKKK GVDNEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle