YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169615701, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.86
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSTSTISP FSTFLIAVFF LVALFPSTFV SIAWAPYNSL VDYAFPLPQK RESVVCTSPN  60
   61 ICVANTMSWF QKPLTLPSRS RGSYLVTEHI LKELPEIKSY KTGLLNLFIQ HTSCALSLNE 120
  121 NFDSDVRADM SDALDRIVPE DPGSKKGLYR HDAEGADDMP AHVKSALVGA SVTIPITNGR 180
  181 LNTGTWQGIW YLEFRDVKHT RKVVATIQGE KM

Type	Start	End	Confidence
Signal Peptide	1	33	0.85
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	212	0.96