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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111059334
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MANLGTLAIM IDDELRIHSC LFPGIVSSAP ITSALCAQPP SYMFLRAHPL KTSLPPSTFL  60
   61 VSNHHTVIRP AQQLGRRLAH PRSISQANST YRSPWKVSSE HYKTNSISWT LALAFGVAIG 120
  121 GALLVPLAHK SPKGEITRHD SVASFDLTDL TDSYLVMAPN TPPGRPGTLT AEEEKKLREL 180
  181 WAMTLKVFGV DASVEEANGA ETPVAAAAAS DAGSEKDVKK DKKKSRLNVF RRNKDDKTAD 240
  241 SKTTSAGSTT PSDISSLSIS ADDDKFGQTA DFKAAIANTP PEELRRAFWS MVKHDHPDAL 300
  301 LLRFLRARKW DVEKALVMMI STMHWRLDEM HVDDDIVKNG ELGAMDDTNA TDAKVKKNSE 360
  361 DFLAQLRMGK SYLHGLDIEG RPMCFVRARL HRAGEQTEES LAKFTVYTIE TARMLLRPPI 420
  421 DTATIVFDMT DFSMANMDYT PVKFMIKCFE ANYPESLGTV LVYKAPWVFN AIWSIIRGWL 480
  481 DPVVAGKVHF AKNIDELEKF VPRNQIPSEL GGDEKWTYAY PEPVPGENEK MNDQATRTAL 540
  541 EGERADVVKK YENTVVQWIH EGDGDLEEKR NERNGVAEEL RQNYWKLDPY VRARTLYDRM 600
  601 GMLSEGGQLA FYPKAQTTPA PAAAAARVST SADDLD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle