YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|111059234
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASFFENLWQ SIFTPGPTPT LLVATNASFA ALQVLLFAML LATYSIHFII LSFLCGGLWW  60
   61 AINWFAAEIR AAQAKEEEAK RIREARRGKD KGEKGTDAGD EGEGMDSGDD TEVDNELEVQ 120
  121 KQRPTQARSA RPESQSTVLV DRPSERSRRE ETPQASAGAG GPAAASTTGA TTKLAPLVDD 180
  181 ALKKRKGLGE STGDLSTDSE WEKLSEDAGD R

Type	Start	End	Confidence
Cytoplasmic	1	17	0.73
Transmembrane Helix	18	40	0.81
Non-Cytoplasmic	41	43	0.58
Transmembrane Helix	44	66	0.86
Cytoplasmic	67	211	0.88