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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111059117, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.95
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSDAERDPS RRRPHGEERR RRRESHGDQD PERRRRRESR GENTPYEQDG RRRKGHRATD  60
   61 SSGDLLPRPR RQSDSAKQSP SPRKSRRNST TDGSGSRSRQ SAQLSLDALA KLDKVNAKKA 120
  121 GGWGQYDYDD EYLREVRKKE KDLEKERVKR ERAEKKKENM EVEARRATEV DAAMQEEKAK 180
  181 RRREERRKQR ESQQPLVPPV DEREKRRSAH TDDEREERRR RQEAKYTASE IDQKRERRRQ 240
  241 EKQHRTEQKK RRVISGPLAE EGGVDDDEYQ YMMEKRGGGG RSPTVYSEEQ LAKRKKWKKI 300
  301 AIAVIAVLLL LAIIIPVAVM LSKKSSGNNS SSGGAAADTQ PNTSNLEGKD RNSVPQEDRG 360
  361 TYYDPWSWYD TMDFNVTYTK ETVGGLPIIG LHDSWDDDVQ ANPKVPNLQD KFEYGKMPIR 420
  421 GVNVGGWLNI EPFITPSFFE NYGSKEGIVD EWTLMTKLGS RAKDTMEKHY ATFITKKTFS 480
  481 DIRAAGMDHV RFPFGYWIVQ NFGDEPYVAQ VSWRYLLRGI EYCRQNGLRV NLDLHGAPGS 540
  541 QNGWNHSGRQ GKIGWLNGPD GDLNAQRTLD IHHKLSVFFA QPRYKNLVTM YGLVNEPRNV 600
  601 ELDTDKVVAW TQKAVTQIRS DGITAIIVFG DGFMGLDNWQ GKLQDNKDLL LDVHQYVIFN 660
  661 IDQLSLKHTD KLNFACKAWT QQSKRSMDKA TGFGPTMCGE WSQADTDCTQ YINNVATGTR 720
  721 WEGTFNTGNA STSVLAPQCP LKTAACSCTK ANEDPANYSD GYKKWLYQFA IAQMDSFEAG 780
  781 WGWFYWTWET EKATQWSYRR GLEAGILPKK AYDRDWKCPD GNTYDSFSGL EEYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle