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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111058045
Protein type: Globular with Signal Peptide
Type Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPPARNRES VAGLFHGAEA AWLSKHRRDW YKHHLRINYS TRTATFSSDP REARHRRLSG  60
   61 LEGPSTSALF QHSFPQPEEL EDEDQEGAKG PGASAPNGKA AATTSTPPAL QVPRGSEQKD 120
  121 HVLVEDEGDE FVDAPSEPED EGDLRVYTHA EDDGGQDAPT KPSRSSTKSF VTASSTPLTA 180
  181 DVDKAREDAP LHGDRRQAQA SGLQVSQEHQ ETGPKSLGKR PVSSVESHNI PASPGGQTSV 240
  241 DAGSTSSLIR KADMNKAPAP ADVDSKSPAK GILARVKRRS ENALSKSDPP NDAEGADAAL 300
  301 TQKKSNLRNL VKFDIPEDSK RAKVHLAAKQ AQMTISRAPT KLRRQRLRDG LVVKMERMLV 360
  361 RVDAAGEVPD DFDENVNQRV NSRVKDKWRE YMIVCRHNHT DNADFVLQLY QTRVIPEIAR 420
  421 QGAGKKAAYE VPLGRKTSKV NLYSSLDKSI VVSTPGKRGS LIFIMQARTA SNAVEWYTFL 480
  481 RNVMGWRRAS ELQINIPDMS LNVRIADPFK KLEASQNQVQ QVEDTEQAMM KTMREEQAVA 540
  541 SDLIRKCLAE LEQAPEWADV LDSWIRDQRV GLAWKRYDRL EWIHGANERK MYGTIAMLKS 600
  601 HELELRPKSH YPTTAVTRKK HKTLIEPVPV EGFLIRLTGQ RGRVKRLGLM YHKQLYFASH 660
  661 DQYLVFSRPT KITPPPPPKL PASRDATVPA AQAVRDVIPE SWAVNPFPVK DAQIEWLSPG 720
  721 HSGTPESRRL HDEDAADEAQ RKGQNLLNCD GYINLADVIK VRKAKLGASP ADEDLEEGSD 780
  781 VDFDEEVDDT TRDDGATNDI DLGRTFELVM KNGLVIRLQA ADKARRKDWI QHLRALAKYW 840
  841 KHRTASDIAL YKATRSRNLS ALNIDEEAEA HIGQFARKWE VTQSFASPEL YNMCGIACCR 900
  901 SIHMSGMLYR KPRIHAPFTR CGVMLTAGTL LIFRDVLRSR VGKQLKHIHH ERIANLDLKD 960
  961 CYIYSGLLTE SDLLYQNQTF DANKPGHHAL PRIYLEDGWT STDEDVMTTF VIWHGKAKSW1020
 1021 FRAEEGAGGG EQERKEGKRT RIKRVAKLGS KGRSVVFRAR SRAERDHWVL AIQNEIERAQ1080
 1081 GDTADFRLEE AAEPAKVLDD SSSNAAQVNG SG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle