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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|169620806, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWKLTKKLK DTHLGSLVPG SSTFSRSSST STIVNDEKNP ASSATTSVDS KDPNGIAASE  60
   61 ANAAPPPPPL RPGILIVTLH EGKGFSLPPG HENTFSSGHH QGSLSQGGGF SVAGSVRPGS 120
  121 SSRNAVAGSY ANRPQSAAGS INAAPTIHGR YSSKHLPYAL VDFDKQQVFI NAVSGNPENP 180
  181 LWAGGNTQYK FDVSRVTELS VSLYIRNPTA PPNAGRSEDI FIGTLKINPR FEEARQDAKS 240
  241 TKSEQAAGQA GAEWIKVNFG TGEMRVGVNF VENRQDRLSI DDFELLKVVG KGSFGKVMQV 300
  301 QKKDTHRIYA LKTIRKAHII SRSEVAHTLA ERSVLAQINN PFIVPLKFSF QSPEKLYLVL 360
  361 AFVNGGELFH HLQKEQRFDI NRARFYAAEL LCALECLHGF NVIYRDLKPE NILLDYTGHI 420
  421 ALCDFGLCKL DMKDEDRTNT FCGTPEYLAP ELLTGAGYTK SVDWWTLGVL LYEMLTGLPP 480
  481 FYDENTNDMY RKILTEPLHF PGPEIVPPAA RDLLTRLLDR NAEKRLGAKG AAEIKAHYFF 540
  541 HSIDWRKLLE RKYEPSFKPN VVDAKDTANF DREFTSEAPT DSYVDGPMLS QTMQQQFAGW 600
  601 SYNRPVAGLG DAGGSVKDPS FEGVNER

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle