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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111056786
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.39
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPAPTTTE GLPTGSGQSG QYESSQHEDS AESGEDVSPT REFTDGQAPK PQPLQKRRRV  60
   61 TRACDECRRK KIKCDGKQPC THCTVYSYES QLKRAKALLH VVFPTVDLND PSIDSHLQSG 120
  121 LLPQLPVAGP RPQAVQTDPR LLPSHGDQPL EDVNDSHLEA MVKATGHLDL DEEGNWDYHG 180
  181 HSSGVSFMSG LRQFGEMFQI PADSSPSLKH RSMSQGPPSP NSTLSLADTS SATPTGADLP 240
  241 PKDEAQALCD AAIVEASAML RVVHLPTFYK QFDRMWELSP DQYGNAENGF LPLLFAVLAL 300
  301 GKLFSKHDSD LDKASYETLI DEGYKYFRAA RQLIDVTDCR DLTALQTIIF MIQFLQSSAK 360
  361 LSACYAYIGV ALRSALRMGL HRSFNTNFNT VESETRKRIF WVIRRMDSYV GAMLGLPRFL 420
  421 EDEDIDQGWP AEVDDDYITE DGILPMPEGS ISVMVAFNAH TRIVQVLSKI CKYVYPIKGT 480
  481 HSSDKNSVTY TVSYSKIREL EQDLAQWLDE LPAALRPGGE QSALITRVQQ MLRMAFGHAQ 540
  541 LLLYRPFLHY VSQASSGKVV DQRAFACASA CVSVSRNIIH ISTEMRKKGV LAGAYWFSMY 600
  601 TTFFAIVSIL YFVLENPTNP TSFDLLRDAV EGKEVLAFFS KRSMAADRCS SALKSMFERL 660
  661 PESIKHGGEI IESKKRRHDS SPQSFAPRPD LLKDDFMAPR RASTFPESMP DVKRTALSHS 720
  721 LPLSQSHLAN LGLDPAYNSP TPSDGSFFDS VPGLTPTSST ASLQGFGLGP TQTPQQRSSF 780
  781 PATPLGANYA DPSGLNVPDI STMMFPSADP LAYPNQPMTA FESRHPQMFD RNTASPAVGI 840
  841 PQPMSGIDIK SHAAQFAPPG FGANQPRRDG DVQLFGQMPM YLMQGGQAQR GFQPHHGSPN 900
  901 MHLPSNNLQF DDLLNQDEWA NSFLDPSLGL NNSPAQFGGR GQFAPSGQGM GGWR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle