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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|121607214, gi...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAARCPFLCP PQLEFRLNNQ WFSKIAVWLV IALVLFTVFK QFDARGAAGA GAIGYSEFLE  60
   61 EVRNDRIRSA TIPEGLSGGE IVATTTDGSK IRTNASVLDR GLVGDLLNHN VKFDVKPREE 120
  121 GSLLLTLLIN WAPILAVVGI WVYFMRQMQG GGKGGAFSFG KSKARMLDEN NNQVTFADVA 180
  181 GCDEAKEEVK EVVDFLKDPQ KFQKLGGRIP RGLLLVGPPG TGKTLLAKSI AGEAKVPFFS 240
  241 ISGSDFVEMF VGVGAARVRD MFDNAKKNAP CIIFIDEIDA VGRQRGAGLG GGNDEREQTL 300
  301 NQMLVEMDGF ETNLGVIVVA ATNRPDILDA ALLRPGRFDR QVYVTLPDIR GREQILNVHM 360
  361 RKIPMGQDVA PGIIARGTPG MSGADLANLC NEAALMAARR NARTVEMQDF ERAKDKILMG 420
  421 PERKSMVMPE EERRNTAYHE SGHALIGKLL PKCDPVHKVT IIPRGRALGV TMSLPAHDRY 480
  481 SYDREYMLNQ ISMLFGGRIA EEVFMHQMTT GASNDFERAT HIARDMVTRY GMTEALGPMV 540
  541 YAENEGEIFL GRSVTKTTNM SEQTMEKVDG EVRRIIDEQY HQARRLIEDN SDKIHAMVKA 600
  601 LLEWETIDAE QLDDIMAGKE PRPPKDWTPR TPPPGGDSSS GGTPEVTTNT APTAA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle