YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|121607092, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMFVSRGLV LVCGLAVAAL LCGCGTRLHK APVEDRGSSL ALQQPAKPPP PGAENAGKPG  60
   61 YYTVKPGDIL IRIGLETGQG WKDIARWNDL DNPNLIEVGQ VLRVVPPLPV APAPDSGVVT 120
  121 RPVTSSTVVP TTPAMAPAGA ASATAPAATP AAAPAPGATI VAAAPATPTP AAEDDLSLIW 180
  181 PAQGALIAGF HEVRNKGYDI AGKAGDPVLA AADGRVVYAG SAIRGYGNLI ILKHNNTFLT 240
  241 AYAHNRSLQV QEEQTVRKGQ KIAEMGDTDA DRVKLHFEIR RNGRPVDPSR YLPAR

Type	Start	End	Confidence
Signal Peptide	1	26	0.95
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	295	0.99