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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|111615484, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRYGAGTGTI IYAKQPLRKN ILEGPGVARA VRAIRAIVDQ RYLPRLHLRP DGARLRADLQ  60
   61 GHGNRQFCAG RADDARRVLR AGADDGGGLS VLAGRACQHC GHGAVRHGAR ARRDPPHPGP 120
  121 AGLFHRHADH RHRLRAAWLG DHDPGHRHRD APTARAIPGP VLSPRRAGAQ RRATGGDACH 180
  181 GPAVRGAVCA VSLQQAGRCD AGRRAEPTGG VLHGHSGAAP RWPGLGAGGG GGGGGRAAAG 240
  241 AGHLRARQYG ADRAQGLSGR RGRRFQQPAR GHRRRPADRH RRIAVGLLPA RGLQGHCRFH 300
  301 RGARHADAAP QWFVWRAVAQ ESLTMRFLFK TSYAQDLRLA RHGGHVFWYG LLCLALVLAP 360
  361 WVVQEYWLAQ LSFVLIYAIV GLGLMLLAGF TGLFSLGHAA FLGVGAYTQA GLTGIGWPFA 420
  421 LALVCAAALS AAAGWVVGLP ALRVKGIYLG MATLSFGFIV EELFARWESV TGGNAGKHLA 480
  481 PPQVWGLSLE SGTAFHFLCL GLTVVCTLAV LNLLRSPTGR AFVAIRDSEI SAQSMGIHLA 540
  541 RYKTLSFSLS AALAGIGGAL YAHKLQFISP DQFGIMQSID LLLMVVVGGL GSVHGAFLGA 600
  601 LFLIAMPQLI ALGKDWLPAT IGQAPGLQAV VYGAVLIAFV LFEPMGLYGR WLKLRTWLQM 660
  661 FPFYRRGMFK RQRSFQKSER LR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle