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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110603650, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNGLLYHTA SANPGSGHRC PQPDEILRRS RRRRRHLVFH RERRDLRAPR PERSGKNHDH  60
   61 LHALDDAETH LGHGDGQRPR CRDAGRRCPQ VHRDRLPGPE PGRRTDGVRE HGLPRPPLPD 120
  121 QRGGAPPAYR RTPDSRRACR PERRPRQDLL GRHAPTTRDR PGTAPRAEGA LPGRTHPRPR 180
  181 PADAKPPLGV YRAVERREGH HHHPHHPLHG GGRPALRPHR DHRPRDDRRA RHRGEPEGLH 240
  241 RRRRRHHNLA RSRGNRRDPD RPMGLRDRAA RRLGDDPPAG GRPAHPRDRD RHPPERRRHH 300
  301 LPLGKKADAR GRLPALHGED DPGRGGGRQR DDTDVPAGKE AVSVDIVYTI WLRNVKRYLR 360
  361 SKSRIVGSLG MPLFFMLVLG FGLNSIVSIP GVEEGYLEFI IPGIVAMSVL FTSVFSGIQI 420
  421 IWDKQFGFLK ETLVAPVSRL EIMIGQTLGG ATTAVIQGLI LMVFALFIGL QPAGISGFLV 480
  481 AVGFMALIGV TFTAFGIAIA SRMEDMHGFQ LIMNFVIFPI FGLSGALFPI NSLPDWLRPL 540
  541 TLADPLTYGV EGIRYGLSGT AQIHPLASLA VMAACAVLMT VAGAYLFRKI QT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle