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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119719115, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSWHAMKVE DVLRELGTSL QGLPVEEARR RLQVYGPNVI EEEKKVHPLE IFLRQFKSPL  60
   61 ILLLIFASIL SYAVGEAFDS IVILALVLAS AALGFYQEYR AEKALEAIKK MVAPQATVLR 120
  121 GGEKVVVNAS EVVPGDVLLL SAGDRVVADA RIVESVNLRV NEAPLTGEST PVEKMVDPIP 180
  181 EDTPLPDRAN MVYAGTVVVY GRGKAVVVAT GKNTELGKIS ATLEAVEERE TPLERELSRL 240
  241 SRWILVFMLV VAVVVSLVGF FVKKYSPIDL LLWIVSLAVA AVPEALPVVV TSSLALGVYR 300
  301 MAKKNAIVRR LPAVETLGST TYICSDKTGT ITKGEMTAVK VWMKDATIEV TGTGYEPTGK 360
  361 LLVGSKEVDP NGYEGLRLLL LAAFNNNDSE VRYQDGRWVT SGDGTEIALK VLALKAGVNA 420
  421 ELPRLGEVPF SSERKRMSTL HELGGRRVVF TKGAPEVVVP LCRYISSMDG RVEELSEEAK 480
  481 RLVLAVNDEL AGQGLRNIAI AYRYLDDGRS TITESDEKDL VLLGIVSMID PPRPEVKDAL 540
  541 ETCKKAGIRV AMITGDHKLT AVAVARELGM LGEDDIVVTG KELDSMSDAE LYEKVEKIRV 600
  601 YARVSPEHKL RIVEALKKRG HVVAMTGDGV NDAPALKAAD VGVAMGRTGT EVAKEASDLV 660
  661 LADDNFATIV EAVKLGREIF ENIKKFLVYL LSANVTELML PLVSSVLGLP LPFTATQILW 720
  721 VNLVTDGPPA IALSLEKGEK DLIYRNPRKP GEPIFSKKEI LLFLVAVPLV FTVLLTYAFS 780
  781 SLLSLGEPEA EARTAIFTSL VVAELAMAYA WRSLRKPSLT LSPLDNKPLV VSIILSVTLQ 840
  841 LAFFASPYVM HVLEIHPVTI NDIIYAALVT AAMFVSVEAF KYLLSKWK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle