YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|126179456, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRTVIILA AVAVIALLGI AVAVVMPPGG TTGTLPLDTI TLPAGFAIDV YAGNVTGARS  60
   61 MTLSPNGTLF VGSRGPGNVY AIPDRDGDGR GDEVITIASG LDSPNGVAFR NGSLYVAEIS 120
  121 RILRYDGIEA NLDNPPEPAV VSDAFPDDAS HGWKFIAFGP DGNLYIPVGA PCNVCDPEDE 180
  181 RFGTIFRMSP DGTDLEIYAR GIRNTVGFDW HPGTGDLWFT DNGRDWLGDD IPPDELNRAP 240
  241 ESGMHFGFPY CHGAAIPDPE FGEEQPCSEF TPPEQELGPH VAALGMRFYD GEQFPEDYRE 300
  301 RIFIAEHGSW NRAEPIGYRV TMVELENNTP VSYEVFAEGW LQGGDAWGRP VDVEVANDGS 360
  361 ILVSDDRANA VYRITYGEVT SPAG

Type	Start	End	Confidence
Signal Peptide	1	23	0.96
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	384	0.98