YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|222055437, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNIVIGLVQ QSCSADRKET ISKTIAGIRE AAAKGAELVV LQELHCGPYF CQTEDTDCFD  60
   61 LAESIPGPST EEFGAIAKEL GVVIVTSLFE RRAPGLYHNT AVVLEKDGSI AGKYRKMHIP 120
  121 DDPAFYEKFY FTPGDLGFEP IQTSAGKLGV LVCWDQWYPE AARLMALAGA ELLIYPTAIG 180
  181 WDPNDNDAEK KRQLDAWITI QRSHAVANGI PVVSVNRVGF EADPSKVGAG IEFWGNSFVA 240
  241 GPQGEFLAQG KNEGEEVLVV KIDGDRSENV RRIWPFLRDR RIDDYGDLLK RYRD

Type	Start	End	Confidence
Signal Peptide	1	15	0.64
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	294	0.99