YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110602135, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRFHFFFLS LLLLFIGNGC AVNPERVGGF NLISVEEEKQ LGEKFAAEIE KEQKVVKDPE  60
   61 VQAYINRIGE KLLTGVEKVE FPYTFKVVKD DNINAFAIPG GHTYVNTGLI KAAESEDELA 120
  121 AVMAHEINHV VARHSTRQLT QQYGYSLLLQ LVLGQDPNLL AQLASQLFGK AGSLYYSRGM 180
  181 ESQADYLGVK TMYNAGYDPA GMEKFFQKLQ AENKQEPGKL TKFLSSHPLT SERIQNVKAE 240
  241 IGKLPPKSFG ASQASPEFSR IKAKVQQQ

Type	Start	End	Confidence
Signal Peptide	1	21	0.99
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	268	0.99