YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110601082, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQWRILLLT LTSLAFFCAS AGAEERLKMS TTTSTQDSGL LKVLLPPFEK KNNCQVDVIA  60
   61 VGTGQSLKLG EAGDVDVVFV HARKLEDKFI ADGFGVNRRD VMYNDFVIIG PKDDPAGIAR 120
  121 AKTAAEALQM IAAKGATFVS RGDKSGTHIK EKDLWQAAGI APKGGWYVEA GQGMGPVITM 180
  181 ATERRGYTLT DRGTYNAFKG KKTDLTVLFQ GEKGLFNPYG VIAVNPRKHP HVKYDLAMKF 240
  241 IEYVTGPEGQ KIIAGYKAYG EPVFFIYGKK

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	270	0.99