YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB_GEODF
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTVIFIGIF GALGCLCRYY LSGWVYDIVG RAFPYGTFAV NIIGAFLIGL IMEFSLRSTL  60
   61 VSPQLRVGLT IGFLGGLTTF STFSYETFRL LEDGELLIAS VNVLTSVLVC LVFTWLGIAA 120
  121 ARYI

Type	Start	End	Confidence
Cytoplasmic	1	4	0.75
Transmembrane Helix	5	22	0.90
Non-Cytoplasmic	23	31	0.67
Transmembrane Helix	32	54	0.87
Cytoplasmic	55	64	0.75
Transmembrane Helix	65	85	0.90
Non-Cytoplasmic	86	95	0.78
Transmembrane Helix	96	119	0.91
Cytoplasmic	120	124	0.82