YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110600504, gi...
Protein type:	Transmembrane
Type Confidence:	0.75
Topology Confidence:	0.56
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTLDAIKTR RSIRRFSHKP VEPGMLHAVL DAARMAPSWA NMQCWRFVVV TDAATRKKLS  60
   61 ELSFVAAFFA PRGYQTNPAQ AAVAEAPVVI VLCADPAQSG EMGGQPYYMT DAGIAAQNIM 120
  121 LAAHSLGLGS VFVGLFYARK LHELLYIPEN IRIVGLIPIG HPHDTITEVP KRKPLEEVVF 180
  181 YGKWKGSSFI E

Type	Start	End	Confidence
Non-Cytoplasmic	1	118	0.56
Transmembrane Helix	119	138	0.70
Cytoplasmic	139	191	0.59