YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TRPF_GEODF
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKVKICGIT TVADAMMAVE AGADALGFVF YDQSPRNLEP AQAAEIIRVL PPFVQVVGLF  60
   61 VHAPLDFINT VTDRCRLDVV QLHGDEPQEF CAAVNRRVIK AFRIKDITSL DHMDEYNVAG 120
  121 YLLDAWSPKA FGGTGVTFNW DTALIAKKFG PIILAGGLTP ENVAEAVHYV SPYGVDVSSG 180
  181 VEAAHRVKDP EKVRQFIQRA KECLGSM

Type	Start	End	Confidence
Signal Peptide	1	21	0.63
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	207	0.99