YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|221564892, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKHIKRSIK SGLPPGTLVH IGAKSDREIR ITVMDYHAGG CEEKEIKALK ECVYYSDTSI  60
   61 VSWIDVEGLH EVEIVRQVGD CQGLHPLVLE DILNTNQRPK VEDYGDYLYI VLKMLHNGDG 120
  121 TGIVAEQVSL VLGSNFVISF QEGMKGDVFN PIRERLRSGK GKIREMGADY LAYALMDAVV 180
  181 DNYFVVLERV GERIEELEDA VMADPRPETV REIHQLKREV ILLRKAVWPL REVISALERR 240
  241 ESKLISEKVV VYLRDLYDHT IQVIDNIEAS RDMLAGMLDV YLSSISNRMN EVMKFLTIIG 300
  301 TIFIPLTFIA GVYGMNFQNM PELHWQWGYF ACLFLMALVA VFLLIYFKRK RWL

Type	Start	End	Confidence
Cytoplasmic	1	294	0.98
Transmembrane Helix	295	315	0.94
Non-Cytoplasmic	316	324	0.89
Transmembrane Helix	325	347	0.93
Cytoplasmic	348	353	0.96