YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119196145, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSRLVRARS SAQLGRFPSS VARRSVTTNA ASAHADNVPA EDDKPFTIKL SDESFETYEL  60
   61 DPPPYTLEVT KKELKQMYRD MVAIRRMEMA SDRLYKEKKI RGFCHLSTGQ EAVAVGIEHA 120
  121 LDREDKLITA YRCHGFAYMR GGTIKSIVGE LLGRREGIAY GKGGSMHMFA PGFYGGNGIV 180
  181 GAQVPVGAGL AFAQKYEGKQ NTTICLYGDG ASNQGQVFEA FNMAKLWNLP VIFGCENNKY 240
  241 GMGTAANRAA AMTDYYKRGQ YIPGLKINGM DVLAIKAAVK YGREYTLAGH GPLVFEYVTY 300
  301 RYGGHSMSDP GTTYRTREEI QRMRSTNDPI AGLKHKLLDW NVTTEEELKT IDKETRSFVD 360
  361 SEVAEAEKMP VPDANSRILF EDIYVRGSEP LWMRGRTVEE TFYY

Type	Start	End	Confidence
Signal Peptide	1	22	0.52
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	404	0.97