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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119195129, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVMNDGLLRV FWPYEFAKST APGVIVGWRN SEFDLFVVSV LEHVEARNVD NALRTGILYR  60
   61 SSPHPISRLL HLCGKSAMHV LGSTNAAEIP TAFTPSHLYA VTNHSSKLPR IYCPPETKLA 120
  121 IQVIMFHRPH PTRMQYMSPF PMSLVLGDKR ATVDTASGAL GDVDAAEEAA KVQSAKLVNK 180
  181 LRLHTVVKHL PTPKEQSLPV IINQINCAFE VDRLLQKNIG LIGTRPKRSL SVGERVVESA 240
  241 TTAWDLFVMG LSYVFTVWIY PIIKQGLITG IIVHRVIAEV VLTVLEWRAR PDAAALKDIS 300
  301 ATAQQVDIRL QQFCYWPIQY LTLRKRKNDW ESVTHSHPDY IRFYNSLWLV ANDVIIGIAL 360
  361 GSYLIDNADW VASQMNSILN GSTVEGLQQT ISWLMDWPAG LKLNNELAAF LGDLFLWVIE 420
  421 HWASALVSLR PFLRHVVYMI GCSGFAGASM ALAMFSDLLS LFTIHIYSFY TASARIFHWQ 480
  481 LTIIISLFHL FRGRKRNVLR NRIDSCDYEL DQLLLGTILF TLLFFLLPTI LVFYITFASA 540
  541 RMAIISLKAT LDTCLAMLNH FPLFALMLRL KDPRRLPGGI KFELRKQSTP NSDDIFRCAP 600
  601 TSYINLQSVP LSLRSMFEQY FQLGHRLRKH YLSPRVILCL VTGRFVPPIH RRNMYSLQYS 660
  661 MLPARRVGIS EIWSRLTERS HTARTGAGRR MPGVVGAGGG SSRVSNGFVN LERRRNRG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle