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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119194841, gi...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEHFGAGRPD GADFDLSQIT GQPPQIFGAP NSDTSPIPPT QPAAAFSEDQ MMGGVEDNND  60
   61 AKRRRIARAC DMCRKKKIKC DGKMPKCSHC INYKTECVFT QVEKKRNPPK GAKYIEGLEN 120
  121 RLGRMESLLR LSGLLSEVDG GKTDLGTLER RLADRSMAAG SQASRIPAVP TAMHSMMQGA 180
  181 SSHQSTPRAD PNLSPRSPAG SPDSQKESEA ELDSLSDMMC SLVTTNCGET RYIGSSSGFS 240
  241 IFSPKGIQWV NEKTGDSSFE DMISSAYIDD NKWIYWKPEI FSDIFARRVF KPLPPRDEAL 300
  301 SLFRDYFENF NCVFPLFHEP TFMHLVERQY SRDPYEGSGW WASINVALAI AHRLRVMSNL 360
  361 VPQEEDKKAW LYLKNAMGVL TELTMRNADL LSVQALLGMA LFLQGTPNPQ PSFFLVAAAI 420
  421 RLSHSIGLHK RGSGFGLNPV ELEQRKRVFW IAYMLDKDIC LRSGRPPVQD DDDMNVELPS 480
  481 EDPPDNIGNV PLSDGKSKVN LFRLLCLFAT IESKVYKQLY STKASRQSDG ELLNTIGELD 540
  541 RELEEWKDSI PLDFRPEYEI KATHRPLILP IVVLHFAYYN CLTTIHRMSV HHGYWTSRLS 600
  601 NYAIQGLNAR PLNPRVFSSA VLCVSAARAS INLIKYIPQG DFACVWLILY FPISALVTLF 660
  661 ANILQNPLDA RARSDVKLMN LVVNFLSKLA TDESNGSVKR MLSVCSEFER IAKVVLDRAE 720
  721 KESQAKRKRK AAGEENGSAE TPNGPNVDIP QAAPKPSATQ PQTTQASPSF SYMPSNATRQ 780
  781 EAAPSMANFP SSRPEQQPVF HTPTAENVPG ALPKGPLGLN QELSDLLGGP TLNQAAGLNQ 840
  841 EQQFSTNSLP IDISAFQQPF VPHELWQMPM TLEWDWAEMP NNGFQFGDEG TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle