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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119194753, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.78
Topology Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLSNILAST AVVAGSLVSA ELDPIVIKGS KFFYKTNGTE FFMRGVAYQE DFSSNGTTSG  60
   61 SDNYKDPLAN VDNCKRDIPL LQELRTNTIR VYAIDPKKDH SECMKMLDDA GIYVVADLGE 120
  121 PKTSINRDDP KWDDELYERY TTVIDELAQY SNVLGFFAGN EVTNNKSNTE ASAFVKAAVR 180
  181 DMKAYIKRKN YRPMGVGYAT NDDAEIRDDM ADYFNCNSED EAIDFWGYNI YSWCGDSSFK 240
  241 ESGYDAVVKY FKDFNIPVFF AEYGCNHVQP RKFTEVGAIY GPQMTPVLSG GIVYMYFQEE 300
  301 NDYGLVKIEN DKAKKLEDFK YLQKQMQKVD PDGVQMSDYK PTNTALQACP TSRVWKSNKD 360
  361 LPPTPNRELC NCIVKSLSCV ANDKIDDEDL GDLFSTVCGL SEEACTGIAT DPEKGVYGAY 420
  421 SMCSPREKLS FAFNSYYEEQ SAKGNGQNAC DFKGSAKRQS PIEPSGTCSS LIEQAGKDGK 480
  481 GSVTSVPNGS SSSAASPMAI SPLNLNFLQL VAYLLCAAMA GAGVILL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle