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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90306129, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.15
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSSHHSDDL PRKINILTLN CWGLKFISKY RRERLLEIGK RLASLEAPPE IVGLQECWTQ  60
   61 QDYNNIRKET RHILPYGKFY FSGIFGGGLA ILSKWPIEES SMFGYPLNGR PTAFFRGDWF 120
  121 VGKGVACARI RIGPGPSDIA AVFCTHLHAP YEREPHDSYI CHRTAQAWEM AKLMRGAAEK 180
  181 GHLVIGLGDF NMLPLSLAHR LITTHAPVQD VWRYLHPDSS LGAAIDAVEM ARKRPVPSAE 240
  241 YNLSENGVTC DGLFNTWRWN KGQQKRLEKE GHIEVDGRLP DPLGKRLDYI FVGNGGPTLQ 300
  301 PSSSSPTQSS VQQPSDWKWT IESARVSMTE RHPTLHCSLS DHFAVEAVIS RNVSSGETSW 360
  361 QEENASFLPI QKQESPHSHA PSNTVTTVTI ATTLPKPPTP STCTSDMYDE IIKMIHIYNL 420
  421 RERFQRRARL GHFLASLGVS MCCLIGVWWS PRAFVSFILC LMSTLSFAAG VIDGLIGGLF 480
  481 VSSELRALRE FEWEIRNAKR LALGMGLDIE EDLGQLGKPS RV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle