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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90305973, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEKNQHSIL PLHHAKGRAL FRVETAGESG RTGFDPLLFL KVCWKSTTPV SMYVNVLWPF  60
   61 VPPAIVLHFA RPDLHLWIFI LNYIAMVPSA NILGFAGGEL ARKMPKVLGV LAETLLSGTV 120
  121 EIVLFMVLIS NDHNNNLIPV IQAAILGSIL ANLLLCLGFC FFMGGLRRDE QTFHEVISET 180
  181 GSGLMLVAGF GLMIPSAFYS ALAGSTSSEG AFTADVLLRN TRTISRATSV ILLVAFFLFL 240
  241 WFNLQSHHGI YDEVLEFDEA QDEDRVEEQR RAKLTFTECV FAILVSLTCV SLHAVFLVQE 300
  301 IPPIVERGVS DNFMGLILVP LVEKAAEHLT AIDEAWDNQI NFALYHCLAP SIQTALFNAP 360
  361 LVVVVGWGLG KQMDLNFEIF MIVLLVLSII VVGNFLRDRK SNYLEGGLLV LVYMIISVTT 420
  421 CYLYYAQCPM SKTPLGLFAV RNQQAWHEAC CLQLAFIPVF PTSPPDPYEE GQYNKMEEEV 480
  481 VAILKSRDIP FKYEDIRTAL EDPGTRDWVR KHLGDDTLLS REELTLYSKI EASAGLDAIV 540
  541 QGSEFSGTRP VLDDEIKTAT ESLKASTSAT ESQTEALRLQ CRELKSQIRE AEQVEQQCSK 600
  601 SASRLSTGHT AERQQTDLAI EDLIHDFEEK LQAAQKTLST DQNNLISTTS SLLREHDVVL 660
  661 RNMEKVAANS QSVEESSLLK KRVSDLCALL ARYIAEEISC RLDRVFLETV ESAKDSEDDD 720
  721 PHVLEKLESV DAEINSLYPE ISILSDMAAR QQFHSPILRV LEEWQERSQL GVEEQLQHVL 780
  781 ETIIQLTEST DSITEKLKTR QAHQSALNSL ASTYQDEVSR HKLQKAKPEN KRLSKYSSRL 840
  841 SQAYASPRES MEMKAGSAEN ELTRSLETML RRYGISFSSL RNAKSTEAVN DILNEKASHM 900
  901 LEMLENIYAT AASPLIPNLG SADKAAQLLS SAMHCDSDFQ PSLVDRDQQQ RIANLEVQIG 960
  961 AVQKGIESLN TDILHQSDLA RENFMERWG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle