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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90305959, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.87
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEVHSAREA QNTAERSSAS SSTVLPRKGS DASPEHRTQN GDVELKDINS RNEGERALPI  60
   61 EEDIMQLARL GEIGAIQKLF ESGKYDAKYR DEEDITPLHW AAINNRYELC KFLLDSGADV 120
  121 NAKGGESVAT PAMWAAQRCH YYIVELLLRY GADPLLTDVQ GYNILHLATI DGNAFLLVLL 180
  181 LHQEIPVDVT DPQGHTGLMW AAYKGFPACV DLFLRWGANV NAADEGGLTP LHWALVKGST 240
  241 PCIQKIIEYG ADRYAKTRDG KTPAIVAEEM KTTHFWRRAL SECGYDPNGD VIQMPLGLAT 300
  301 ILRTRRYISK FFFLWPFAMI FGAVWILSEF TVYVSVPLTL AFIFGMQWMA QWVANRSHAE 360
  361 FRVLQRTSFL AGVFAASLFW IGVRWLLTVL PDTYSTYPFL NFFFAVFFFL TSYFYFLSMI 420
  421 EDPGYVPKLS SRNQQRTCIM ELFKSWQFDE DNFCVFCMIR KPLRSKHCRR CRRCVSKHDH 480
  481 HCPWIDNCVG TNNLRHFVLY IFSMEVGALP PPTDSECNIL SSSLCSMVKR DTFTIILTFW 540
  541 IALQLVWVTM LCVVQLVQIS RNQTTYENMK GHAFDYANPA SRAITSALTT GTTSAELGGL 600
  601 NSTGQGPNPS IPPPGHRRHH RHAHGGCLSQ WKKLLGLDTF MATAQEGLGD RRAARAQNPF 660
  661 SRGIVTNCRD FWCDPAPYFG RRAPGSAMLN GEVVNYNDMY ERASDGRLLS DKHASTQHLR 720
  721 VNSLSSVDRF QIVITDALKN LKAVGTFVDP AAHQGFFFSR HPAATIPRKR V

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle