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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119193086, gi...
Protein type: Transmembrane
Type Confidence: 0.95
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPEQLLHAIS LAARAGGLAG DVGSRPPVFK AVGISLAVAS GLFIGVSFVL KKVGLLRANV  60
   61 KYNEEAGEGY GYLKNFYWWA GMTLMILGEI CNFVAYAFVD AILVTPLGAL SVVVTTILSA 120
  121 IFLKERLSFV GKVGCFNCII GSVVIAMNAP QQSSVSNIQD MKRYVIRPVF LTYAGVIIVG 180
  181 CTVVAIWAGP RYGKRSMFVY LSICSLIGAL SVVATQGLGA AIIAQISGQP QFKEWFLYVL 240
  241 LGFVIITLLT EIIYLNKALN VFNAALVTPT YYVIFTSATI ITSAVLFQGF KGSPISITTV 300
  301 VMGFLQICTG VVLLQLSKSA KDVPDAAIFK GDLDQVREVA EQEQPESEPK ADAIRGTAAI 360
  361 IRRISTPRQK MERDEALRYQ SERKLDESWS PGENEIIEWD GLRRRRTVLS VGPTATPRRT 420
  421 KTPRPPLGMS RFPEDDEDSE PKSRTGRSFL DSFRSRTSSG RSSRKSSENS QSTETRMCSI 480
  481 ELESIHDRSR KNVDGQHRYT EVKNYPATTL LEPFQYESQK RMRSGTVGSV RFADDVKTID 540
  541 DSPQRQRSRS PPTPPAHRQF SFQRLFHREG SSPRADISSE LSPSRDNRFL GFSNFRAHRQ 600
  601 PPQQRRVTKN ATEEEVLGLV RDGAMDTEIP HDRSRTPSPT SSILESMNEK PFGESNMSYP 660
  661 SRSRRSSSTS SSSSSEYHRS FDRIPSYVKG DDHLYNVVRT SASDPFSVTD QDNPAGISEL 720
  721 RVPHNPDNER SLTAGTDNVA HPPASYQRPL VQGRDLPPIP VETTRSDGTS LFDPPQNVYT 780
  781 TNPNISIPPL PPDPRSIPSA PPSISSDMDS VEEEILEDHD DRDRAGSRNR GPTSLSSSNG 840
  841 VAFI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle