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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119193044, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNTNIPASP TARGSSPNPG RDVQRAYQGS PHRVSPFPET QIGPQGASNR HGKKRKHRHH  60
   61 KRRRHRRPSF APATVETPPA GSPSREAEGI PEEGETAAPT DTRRASFYRL GQLGGATLSD 120
  121 TSLDSEALLD HRYESCTDQG PYPNQPMMRT RRESRLAQSS RPEYPPLSSL ASPDNRSRPS 180
  181 AARLGVKTSD ESEPESDEAD DRTPLIRPTS LHNTNFVRYG TDARDIPRPS RRSSGRSISH 240
  241 SPRDAYDSKR SYDVNNPPSM PGSPKPGAEI AYDDSLITGE EYSRSKSPGG GGVPAFPRDV 300
  301 VIDMEGPDRA DQIGSAPPSP PVSLKRRRTV TLPVEEDVCF PTGALSDLGE EEFTPHPPIE 360
  361 GYTATPRRRR RRVWPDLSVL EEWSREEKEE RTEGIRAKKI SEPVLIGGRL RTRNAPWRRE 420
  421 EEEAPYRFTY FNEEFQSTIH SQTISELVQP GQTFKDLFFP EPPELESGDE EEEDEFRPLT 480
  481 LNGTRTNSLS MPGYNGRSDR DSAVADSREV SPNHAPGSSP TQKEKRYGPR PTFWLDVLCP 540
  541 TDAEMRIIAK AFGIHALTAE DIMMQEAREK VELFRHYYFI NYRTFEQDVN SENFLEPVNM 600
  601 YVIVFREGLL SFHFSQTPHP ANVRRRIRQL KDYLILNSDW ISYAIIDDIT DVFGPLIHSI 660
  661 EEEVDDIDDT ILRMHSDSKD PNDTAPPESA VSGSDMLRRV GECRKKVMGL YRLLGNKADV 720
  721 IKGFAKRCNE QWEVAPKSEI GLYLGDIQDH ILTMTGNLTH YETLLSRAHS NYLAQINIRM 780
  781 NERQEQTADV LGKLTVLGTI VLPMNIICGM WGMNVKVPGQ DVENLHWFLS ITAGLVIFAF 840
  841 VCFYVAKRVY RIV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle