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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119192066, gi...
Protein type: Transmembrane
Type Confidence: 0.94
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSLFVLFLV YVLGGVTFIP VVFGLLFLHA YLTLPSVENA PELDKDGSDG IHRSADDQSS  60
   61 VQSGTDVLAE KFQRTHESDV AAGYFTVCRE YVPGGVNGKP PERTTPAGEV ITPESPSVYQ 120
  121 SMYRSIFERK QAPTIDPAKP NGKNIKKGRN VFYIVLRHGH LMLYDDSEQV EVRYVISLSH 180
  181 YDVSIYGGGE SIPEGELWIK RNAVCLSRKS SQSDVNNPQV TALPFYIFSD NPSEKEDLYF 240
  241 AILKNLEKLP DSPISPPTAQ HFDVKDIVNL VKRLHSSEEN LQTRWFNALV GRLFLALYKT 300
  301 SELESHIWMK IAKKISRVKK PNFITSIVLR KINAGEGAPL ITNPRLKDLT VDGNCCVEAD 360
  361 VMYDGNFRIE IAATARIDLG TRFKAREVDL VLAVVLKKLK GHGLVRFKPP PSNRLWVSFE 420
  421 TMPEMEMTIE PIVSSRQITY GVILRAIESR IREVIGETLV KPFWDDVPFL DTSRQPHRGG 480
  481 IWQETSRPIS DHGVADDFGV EQRPAKEPSD EVLGSEGQTV GVVSLSPPPS PDSNEQNKST 540
  541 LTLDDAPAEV DNISQVDLHP PPGQGSSEPE LPLTSDSSSA EHMALDTKLE DTDATSTMVD 600
  601 LPTYSNNTYA GSLHHRSRQR SISFQKSHDH FTNSRSRTDS ILSKASTSSI PESSDGDSAG 660
  661 LTAKNINHQE GSPTTRLGSS PSSPKPLETR QTMSSLGSAA AAAAKKWGWN VLGRTDQSHK 720
  721 VGGTVIPDHP IGRGRPLPPP GTPLPPPEKS TFRVNPISMP KRKPLAPHLF PETAERSEKN 780
  781 LPERRPMRHR KSTSSTKTED SRTQEELLII RAPSGSEPNS PLPAEAESPE KPPLNGENTD 840
  841 KQSVQNGNLP GLSASPTTKA NVLDANGHEE SRHALDATEE VIAAVNPVEN LVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle