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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90305331, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAPAVPMG GAGLRERKIQ ASRTQEPSPP ADSLMSKMRT DESSKIESEK KTFGRTPDGT  60
   61 VFTVPHTRDM VSQLLSPSEP KNLSDILVLT ILALHILLLR SLPASIRIPV FAVIFLSWRA 120
  121 AYNIGIGWLL HMQSNHRTLV LWARKLRLFV DPATGQNPHP FLYRFIKREL ETKIPEDYTF 180
  181 ESAPIEYNTW LVFRRVVDLI LMCDFTSYCL FAVACGSRPI GEGLFVMMLR WLAGTSLVLF 240
  241 NLWVKLDAHR VVKDFAWYWG DFFYLIDQDL TFDGVFEMAP HPMYSVGYAG YYGISLMAAS 300
  301 YKVLFISILA HAAQFAFLVL VENPHIEKTY NAPPPRKRVV DHDTALHEDV GSRSNSFNSD 360
  361 TTPPLPVPST TQPRSTHALV GSMDVHRVTD VSVLLIHLLF FALTIITPST PAYQFFFVLN 420
  421 AAVWRIWYSA GIGYILDRQS TRKSWTRHFV KFGEGQDEAW RQWKGIYHLS MTTCYASFIA 480
  481 AAWKMYTLPQ DWGYGLAILR HVLGASLIAL QIWTSMSIYE SLGEFGWFFG DFFYDESPKL 540
  541 TYSGIYRFLN NPERVLGLAG VWGAVLITNS RAMIFLALLS HTLSIAFIQL VERPHMQKLY 600
  601 GRSLRRDAGL VKSIKRSLPN SLKQFQGSVD KILDESIEFV EEVIDTARPK LAAGVNTFVK 660
  661 DTTALLHKYP ARITITRLEP DLAGYEMKDY SLTVEGTQLA QFDKSTDATN NKSRNSRRSE 720
  721 DLVLEYGAPI KVKWTAPLNH SKKDWIGLYM VTHNSSREIT KVSSQGRWIA TNEGAFDSLT 780
  781 SEVGLKSSDV IIKYAGNDND KTREVASGEI IFSGEKLWWN QGVFEFRYHH NGKHNVMAIS 840
  841 RPFEIRIAKF DENEIPLDNY AVVRPAIEGA LLPIIQNCLD RDPDIAPQNA EEAFGSQVDR 900
  901 DSKYTKRVVF AVQHMFGIEF APEVVSADGN VRNLAWRICN AKKVLAPYSM SCASGATTPV 960
  961 QED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle