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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119175906, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGHANGSGGR SGGAHIDKRD FDANRRLLGG EDVENGRAAG QLGRCSNESD GLFCDVVTEI  60
   61 VRRDRELMRR ELVRMGSFVW GVLTASCAGS ITGFSVYGPL LLSHLHYTQF RVNAVAVAAE 120
  121 LAMYLPVPIF GYLCDRYSPG PVAILSAFFF GPGYLLAALT YRSGPPPDAG GSGWPYFIMI 180
  181 LGFLGVGAGT ASMYLAAVTT CAKNFARSKH KGFMLAMPIA AFGLSGMWQS QIGRHLLYEQ 240
  241 GPNGEKGDVD VFKYFLFLTI MLFSVGVIGL FALRLVDEDK LIDEAVEELE RSGYLDESSF 300
  301 FHSREEVEAS YGTFGPDHSG NSRARDDDGD SVTSSREEKK KKTWLLNQET KIFLRDKTMW 360
  361 CLAAGFFLAS GPGEAYINNV GTVINTLSPP SYPPNLPPPA GYPSTHVTII ALTSTAARLL 420
  421 TGSLSDMFAP TPHSHLQVQH EPSDLATPKV RLTLSRLIFL IPSAILLSFG YLYLSTPLAL 480
  481 NYPSTFPVTT SLVGLGYGAA FSLVPIIISV VWGVENFGTN WGIVAMVPAL GATVWGVVYS 540
  541 AGYEAAISPG ERDLKFKLFL NWKIKNIYHQ PASRPSTSER RSFGHGKDIL SDILDDSLFD 600
  601 IEEVTNPPKR RRLSPSLDIS SISPQPRPNA RAVLSSLLAD DSPQVGESYQ FEGNQSCRFK 660
  661 DWDDEISDPD TRLSSGGRAR VSYRGRDPKG STDVIIIDND SEDLEGNGIL PNCFDPAPPS 720
  721 ASRLAYSDRT SSLLVRLHDR REDSGKAVMK SKASISLSDE DSGLPRVART RVKRPADSSA 780
  781 SDKTAKALVR EAAKFRREKE KAEEKERKRN LKEEKEKAKK FAADIAQANK LKINKKESTP 840
  841 EMLVDMSQSF EDSSVGTQVG EYMRHLGVQI RFVSTKIPNI VSWRRKITAF YNDEVGHWEP 900
  901 CPLKIRREEH VLCFLSAQEF VNLVVAPEVD QSVESHLRKL LRDYPGCKPI YLIEGLTAWM 960
  961 RKNQNVRNRA YQAAVRRQMV ELGNSATESG PSNRRSKRAA PPEPPIDDDA IEDALLQLQV1020
 1021 QHNCLIYHTA AAAESAEWIK NFTEHISTIP YRRERLNVQD AVFCMDSGQV KSGVDVDDTY1080
 1081 IRMLEEIQRV TAPVAYGVAV EYSSVRDLVN GMREHGPLRL QDAQKCANKS GALTEARIGP1140
 1141 AVSKRLHKIF TSLDPASTDI 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle