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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119175116, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVLVRRFTLA LIFSFCFLFS LLHLNSSGTN REPSGTKRPL RNWWKDYATE YPVTSMISLP  60
   61 TGSPKQIPPI QFNFGGEDEK TKTLREQRRD AVKNAFLHSW KGYKERAWGY DEVGPVKGNV 120
  121 RNTFGGWGAT LVDSLDTLWI MGLKAEFEDA VTAVQRIDFS YCEEPLLNVF ETTIRYLGGL 180
  181 LAAYDLSEGA YPALLQKAVE VADLLYLAFD TPNRMPVLRW DWQGARDGTP QEASHANILA 240
  241 ELGSLSVEFT RLSQLTEDPK YYDAVQRITN VLQENQNSTR LPGMWPLGID ALTPRFIADR 300
  301 RFTFGAMSDS LYEYLPKEYL MLGGQSSQYK EMYEVAMEVA RKRLFFRPRT AAGEDILISG 360
  361 AAYAVGKSIV HLKPEGQHLT CFAGGMVALA SKVFDIPNDL EIGKKLTEGC IWAYRSMPSG 420
  421 VMPEIFTAVA CDENEDPGCK WSPRLWFRSE DDERMTIGEL EKKAQKQGLI PGFLKIDNAQ 480
  481 YHLRPEAIES IFLLYRITGD TSLQDKGWNM FTAIEKHTRT RTAHGSLSDV TVSKPEVLNE 540
  541 MESFWTAETL KYFYLLFSEP DLVSLDKYVF NTEAHPLKRP LEELKAEGIG LRCYTAWHDV 600
  601 TPRRQRYQVK CFEKLAAETG LKDETAGYLQ INTLQSPDNT CQLHHMESFD DVALSANASS 660
  661 ETVALDEQSG GQPQHAEDTE IKRSSCDNAI LSGKSEKTGH DGPNGSQQDV PQPQREANEG 720
  721 GDTPPAFPQL QFQRRNSTDM PIFDGDGDGG DEEPNVAKSF ERSSSPNAAT LRSREGGDER 780
  781 PCDDGISRMH KFSLYETSTR YYMVGMDLID KRFRILKIDR TSESDDLTIS EDDTVYTKRE 840
  841 MNQLLDAVDD GNKSSGGLKL RCSAWGLLGF IKFTGTYYML LVTKRSQVAM IGGHYIYQID 900
  901 DTELVPLSSS SSSKTKSEKH AEETRFINIM NNVDLTRSFY FSYSYNITQT LQRNIASERE 960
  961 ALEKGQPGAN SHNLNSMFVW NHYLLMPVVD SLKNAYDWCL PIIHGYVEQT SMSVYGRLVF1020
 1021 ITLIARRSRF FAGARFLKRG ANDLGYVAND VETEQIVAEM LTTSFHAPGP KLYCNPHYTS1080
 1081 YVQHRGSIPL YWTQDNTGVS PKPDIEINLV DPFYSAAALH FNNLFERYGA PVYVLNLIKS1140
 1141 RERMPRESKL LVEYTNAINY LNQFLPEDKK IIYKAWDMSR ASKSRDQDVI GTLEDIAQDI1200
 1201 IPRTGFFQNG ENAEAGLKMQ NGVARTNCID CLDRTNAAQF VIAKRALGHQ LYALGIIDRT1260
 1261 TVDYDTDAIN MFTNMWHAHG DTIAVQYGGS HLVNTMATYR KLNQWAGHSR DMVESFKRFY1320
 1321 NNSFLDAQRQ EAYNLFLGNY VFSQDQPMLW DLETDYYLHH SDPRSWAEAN RHNYVNWYTP1380
 1381 AFLKERQMPL AVWPKGISKA PVRAFDDYWL EYYRPLAVSS FSKVFAFKMK STLHNLPFRS1440
 1441 TQQGQYDLSP FVVRADHETE PREKKTPRKK VLVIQEPFET LNGDSRSINS TKERLPPSEP1500
 1501 LRLWLQQSAA SENRSSSQSS ILKPQHLPPP LITSNSDLLT PKSQSNQYSL GQLVTESLNP1560
 1561 TISASEAEEY ERYINHPLKV PLVVTSESPI KEATNNKDFD LVEYANKVSL QDPALDASAE1620
 1621 DNLADYIEFL NVGEEGLTVI REDYGKKRYK RYRQWLRGKS LFKQGIDL

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