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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119174070, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRLLSRSS ALLSRRSALA ARRLHHAGGI QSGGLLRTQG NGYYLRARLP SVIRQNWIHN  60
   61 VPAVRTISFA RIIPKLAMKL VRVPAMFGGA MIAGLAYLQY QASQAGNYVI DFFKSAGETA 120
  121 GGIASSAIQG IQGVAEQTQR GWERTTEGIE LPEWAQKILR LEEHAEKNGG GSGSDGAGGS 180
  181 GGPKKSRIGA AGVAGATTGS ALGYDSTDDE VAEGRRAVDE QMMTLTRKMI EIRNMLQRIG 240
  241 QSNSLTLPSI VVIGSQSSGK SSVLEAIVGH EFLPKGLNMV TRRPIELTLI NTPNSQAEYG 300
  301 EFPALGLGKI TDFSLIQRTL TELNLAVPEK DCVADDPIQL SIYSPHVPDL SLIDLPGYIQ 360
  361 VAGRDQPAEL KQKISDLCDK YIQGPNIILA ISAADVDLAN STALRASRRV DPRGERTIGV 420
  421 VTKMDLVDPD RGASILSDKK YPLRLGYVGI ISRIPPTSGL FSRGSGNLTN AIVKNENTYF 480
  481 GNHPQQFGPG AEVLVGTTTL RKKLMRVLEQ TMAANLASTR DAVSQELEEA TYEFKVQYND 540
  541 RPLSAESYLA ESLDSFKHSF KEFTESFGRP QVRELLKAHL DQRVMDILAQ RYWNRPIDDL 600
  601 SPPLPDPDPL TDLPKADPES LYWHRKLDAS SSALTKLGIG RLATTVVANA LQNRVDDLIA 660
  661 CSTFASHPYA QKAIGDATTS ILNDRFFSTS DQVENCIKPY KYEIEVDDFE WTKGRENVGK 720
  721 VLKEELKACE SALKHVEDSV GKRKLKDVMN FVDKVRRGDV QVEGDGTGGA GGFSAALIQK 780
  781 GREGAFLRDR ADIIKMRLLA VRSKQCASKK NKYYCPEIFL DVVADKLTAT AVLFLNVELL 840
  841 SEFYYHFPRE LDLRLGRHLS DAEVERFARE DPRIRRHLDI IQKKEMLELV LQKIESLRQL 900
  901 EGRSKPNSQQ RGSLSKERAK SWRLF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle