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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|90298169, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFETTINTS TSTPLDSRSS LRRKPTTRKR TNRKEKRLEI LARRGDQSLL ELGKGCLAVV  60
   61 MTQSQRTRYL KTGGVLALLL FFIYILSPSS NPSTSIGSHT ATSKCTKPHH PSKPLIQYAL 120
  121 MIDAGSTGSR IHVYRFNNCG PTPELEHEEF KMTEKRKGGA GLSSYGGDAE GAAKSLDPLM 180
  181 QVALDTVPEE YRSCSPVAVK ATAGLRMLGP ELSQKILEAV RHRLETVYPF PVVSKEQGGV 240
  241 EIMDGKDEGV YAWITTNYLL GNIGSPEQNP TAAIFDLGGG STQIVFEPMF KVPDQMEDGD 300
  301 HKYELTFGGR KFTLYQHSHL GYGLMAARNA VHKAIVETMH TSNGEDRSWL SDPIINPCVG 360
  361 PGMEAAVNVT LAEDHPLGAK LQVKMVGPKE GSSAAAQCRS IADKILRKDA ECALKPCSFN 420
  421 GIHQPSLAKT FAREDVYIFS YFYDRTAPLG MPDSFTLRDL QHLTSTVCSG EGSWGVFSGI 480
  481 ADALEELKGR PEYCLDLNFM LSLLHHGYEM PLDREVKTAK KIDGNELGWC LGASLPLLSK 540
  541 DSGWQCRVKQ IT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle