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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|119180600, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKRTNESPM DFEWQTKAPG DVTSPFYQLA MEHEKSGNKR PFSVFNSPTK TFTEPNQRFE  60
   61 FSQPLDTTPA FHPNPAFATP RKLDFDFSSG PENSPDTHVD NDETPEPPSK SDRRNSLFNF 120
  121 YGRFAPSPGR GEIPRIDRFA NVAIRRVQKR RKREREVERH LRKVSEADSV STARERYTRR 180
  181 DKPPREGVQK HQDIPFFSRL FTFLESHPHI PRILSYYVQF TFNLVLAFLA LYVIVAFLLA 240
  241 IKHDMDRTRE GVSADILAEM ATCTKNYVEN RCSGEDGRRL PALEAVCNNW ERCMNQDPAK 300
  301 VGKAKVSAQT LAEVLNGFIE PISFKTMIFF IASITSCVAV SNLTFSFFRN KSNNPPESMP 360
  361 SRRPFTPPSM YPSSSQVAFT SGHSGFGMGA PGYAPYSVQG IIPPFDMSPV KCTDTDEHQR 420
  421 QIDFGQFTRR VQTPSPSKRE SKFA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle