YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90300137, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.89
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAADHGRPLV PPKQLRTDYP LIDSDPHVKR VFGYARTSDW ALGGATAILG PLTFAIMERV  60
   61 QPAHSGKINF ARCMRLAGGI GLVAGAITVY QRSCNRFYGL SENKREEEMD MREMVDKVKR 120
  121 GEPLYGESSL SPYMQGVAAR NSRYSSLFIH VIPWFNVVNH NQHGVDTAKY YRQAERELEA 180
  181 ERMQKEGL

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.48
Transmembrane Helix	40	57	0.75
Cytoplasmic	58	70	0.41
Transmembrane Helix	71	90	0.74
Non-Cytoplasmic	91	188	0.62