YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	RM04_COCIM
Protein type:	Globular with Signal Peptide
Type Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRSVISFL YQQGGLSLAE LPPAFLAPAL YSTKASFNSQ RSQFSTSSSP AARDRSRFRG  60
   61 VSAIHRTGPK QPLPVSKYPL PKPASPEQQE KRPANPDHGL WGFFGPNKQA IPTPEEEYAH 120
  121 GRAWTIQELR QKSWDDLHCL WWVTVRERNR IATSNYERKR LAAGYGDFEA DNRDKTVRAT 180
  181 QHAIKHVLRE RWYAWNEARE LYNGGYRPSP DEVLEEETET AMPTEVMPEE LDSSTKSETT 240
  241 TSKNI

Type	Start	End	Confidence
Signal Peptide	1	19	0.47
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	245	0.97