YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|90299479, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIRALRHAD RALISLCPSP YLRIHAASNG RSQLQSALLR TAPLRTLRTS TIASQLNAPN  60
   61 NNKPPSAPAA PKPTTPAQAP PPPKNPLTVQ NISKNGLDDK PPELDLDANG SPTPNGHVDW 120
  121 TRSYHGLSAE PFSKEAANIL LQALDPSDVE IKPDGIVYLP EIKYRRILNK AFGPGGWGLV 180
  181 PRSESIVTPK TVTREYALVA HGRLVSIARG EQDYFNPDGI PTATEGCKSN AMMRCCKDLG 240
  241 VASELWDPRW IRKFKAQYAK EIFVEHQVTK RKSKIWLRKD DDVSYPWKVT R

Type	Start	End	Confidence
Signal Peptide	1	26	0.70
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	291	0.99