YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|240106540
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWVLPLVGYL GVIVGFCFLT LAIASGLYYL SELVEEHTVL ARRVLSRLIH TVIALHVLLW  60
   61 LIDGLPISLT FLSIVSHLVY ASNLRRFPVV KLSDPLFILS CLLVGLNHWV WFRHFSDPAT 120
  121 LQTKYSRSSS HSASFSTGGQ HYGAGSDLPS FTEIASYFGL CVWLVPFSLF VSLSAGENVL 180
  181 PTTGSGYASG PSIGADGSST SPLGGSGNEK KSKSKAMAKA LVDGARGWVS ETGELMGFWG 240
  241 GQKARRF

Type	Start	End	Confidence
Cytoplasmic	1	6	0.53
Transmembrane Helix	7	30	0.91
Non-Cytoplasmic	31	51	0.55
Transmembrane Helix	52	81	0.76
Cytoplasmic	82	91	0.62
Transmembrane Helix	92	112	0.88
Non-Cytoplasmic	113	153	0.76
Transmembrane Helix	154	173	0.80
Cytoplasmic	174	247	0.78