YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|119184636, gi...
Protein type:	Transmembrane
Type Confidence:	0.67
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAETGKLSGG EGLLSYLARP SLAGTFWSSD MTTLPTAIQT PPHIITKHHQ HREPSNVARI  60
   61 PIQGQPLSEL FVSLGETSPV MPARPVSLSA RSRCLLRAPK HSQRQAFSTR SPLNGAHEPH 120
  121 YDPPTGWLFG VKPGQKYVKE GWEGLWTYGF VGSLVVAGIA YSFKPDTSIQ TWALEEARRR 180
  181 LEKEGILEDP DVVKKE

Type	Start	End	Confidence
Cytoplasmic	1	143	0.61
Transmembrane Helix	144	163	0.62
Non-Cytoplasmic	164	196	0.95